CDS

Accession Number TCMCG035C31217
gbkey CDS
Protein Id XP_021632533.1
Location join(23233551..23233564,23233716..23233886,23234245..23234515,23234636..23234719,23234861..23236740,23236865..23237030)
Gene LOC110629739
GeneID 110629739
Organism Manihot esculenta

Protein

Length 861aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA394209
db_source XM_021776841.1
Definition protein CROWDED NUCLEI 4 isoform X4 [Manihot esculenta]

EGGNOG-MAPPER Annotation

COG_category S
Description nuclear matrix constituent protein 1-like
KEGG_TC -
KEGG_Module M00019        [VIEW IN KEGG]
M00036        [VIEW IN KEGG]
M00119        [VIEW IN KEGG]
M00570        [VIEW IN KEGG]
KEGG_Reaction R01090        [VIEW IN KEGG]
R01214        [VIEW IN KEGG]
R02199        [VIEW IN KEGG]
R10991        [VIEW IN KEGG]
KEGG_rclass RC00006        [VIEW IN KEGG]
RC00036        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01007        [VIEW IN KEGG]
KEGG_ko ko:K00826        [VIEW IN KEGG]
EC 2.6.1.42        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00270        [VIEW IN KEGG]
ko00280        [VIEW IN KEGG]
ko00290        [VIEW IN KEGG]
ko00770        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
ko01210        [VIEW IN KEGG]
ko01230        [VIEW IN KEGG]
map00270        [VIEW IN KEGG]
map00280        [VIEW IN KEGG]
map00290        [VIEW IN KEGG]
map00770        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
map01210        [VIEW IN KEGG]
map01230        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005652        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0006997        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010369        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032535        [VIEW IN EMBL-EBI]
GO:0034399        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090066        [VIEW IN EMBL-EBI]
GO:0097298        [VIEW IN EMBL-EBI]
GO:0098687        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTTTTCATTAGTATGGTTGAAGATGCACAAAAAAGGTACACTGATACTGAGGCAAAACTGCATGCTGCAGAAGCCTTACAAGCAGAAGCTAGCCAACATCATCGAGCTGCAGAAAGAAAACTCCAGGAAGTTGAGGCACGTGAAGATGATCTTGTGAGGCATATCAGCATTTTCAAAGCTGATTGTGATGCAAAAGAGAAGGAGATTGTTCTTGAGAGACAAACTTTAAGTGAGAGACGGGAAGTTCTGCAGCACGAACATGAAAGGTTACTGGATGGACAAGCTTTGCTGAATCAGAGGGAGGATTATGTTGCCAGCAAATCTCAAGAGCTAAGTTGTATAGAAAAGGAGTTGGAGGCCTCAAAAGCAAGTATTGAGAAGGAACTTAGAGACTTGAATGACAGGAAATCCAACTTGGAGGTGACTGTGGCTTCCTTATCTCAAAGAGAAGAGGCTGTTATTGAGAGGGAAGCTCTACTAAACAAGAGAGAGCAAGATATACTTGCTTTAAAAGAAAAATTGGCAAGCAAGGAATCTGAGGAAATTCAGAAGGTTATTGCTAATCATGAGACTATTCTGAAAACAAGGAAGTCGGAATTTGAAGCTGAAGTGGAGAAGAACTGCAAATTGGTGGAGAACCAAATTGAGGCCAAGAGACGAGCTTGGGAGTTGAGGGAAGTGGATCTTCGGCAGCGGGAGGACATGTTGAATGAAAGGGAACATGACTTAGAGGTTCAGACAAGGTTGTTAAGTGACAAAGAGAAAGATATGGCAGACAAGATAAATTTTCTTGATGAGAAAGAAAGAAGTCTTAATGCTGCTGAAAGGGACAGTGAGATGAGAAGAACACTTCTACAGAAAGAAAAAGAAGAGATTAACAAAATAAAGTTAGAACTCCAGGAGTCCTTGAATTCTTTGGAAGACAAGAAGAAACAAGTTGATTGTGCAAAGGAGAAACTAGAGAATATGAGAAGTGAAACAAATGAGCTCTCACTTTTGGGGATGAAACTCAAAGAAGAGGTTGATATGGTCAGGGCTCAGAAAATGGAGCTTGTGGCTGAAGAGGACAGATTGAAGGTTGAAAAGGCTAAGTTTGAAACTGAATGGGAGCTTATTGATGAGAAGAGGGAAGAAATGCGTATGGAAGCTGAACGTATAGACGAGGAGAGACAAGCTGTTTGTAGGTTACTCAAGGATGAGCGAGATAGCCTAAGTCTAGAGAAGGAAACAATTCGAGAACAACATAAACGTGATGTTGAGTCGGTTAACCATGAGCGGGAGGAATTCATGAAAAAGATGGAGTATGAGCATTCTGAGTGGTTCAACAAAATTCAGAAGGAACATTCAGATTTCTTGTTGGGTATTGAGATGCAGAAGAGAGAGCTGGAGAACAGTATAGAAAAAAGGCGTGAAGAGGTAGAAAGTTATTTAAGGGGTCAAGAGAAAGCCTTTGAGATTGAAAAGAAAAATGAACTTCAACATATTAGTTCTCTCAGAGAGAAAGCAGCAAAAGGGTTGGAGGAGGTTGCTTTAGAAATACAGAAGCTTGATTCTGAGAGAATGGAGATAAATTTAGATCGTGAAAGAAGAGACAAGGAATGGACTGTGCTGAATAAATCCATTGAGGAACTTAAGGATCAGACTCAGAAATTAGAAAAACAGAGGGAACTATTACGTGCAGAAAGAGAGGAAGTTTGTGCTCAGATTGAACACCTGAAAAAAATGGAAGATGTGAAAATTATGATGGATAACATGGAAGTGGCTAAGATGCAACAGTCAAGCATGGAGTCTAGCTGGCAGAAAATTTCTGCAATAAGATATTTGAGAAATCACTCCTCTGTAAAAGATACTGATCTGGTTTCACATGAAAGAGTAGATATTACTAATAATGGAAATGGACTTGATTCTCCATCTTTGCAAAAATCAGGTGTTGCTTCATCCCCTGACTCTGCTCGTTTCTCTTGGATAAAACGTTGCACTGAACTGATATTCAAAAGTTCTCTGGAGAAGCCCCTCTTGAAGAGTGATGAAAAGTCTCTGATTTTGAATAATGATTATGCAAATTTAACATCTGCTGGCAAATTGGATTCTTCTAATGGATATCATGAACAAAAGCTTAAATCAATAGAGAGTTCTGGCAAGAGACAGCCTATGAGATACACTTTTAGTGAACCAAATGTGATACTTGAACCCCCTAAAGATGTAATTGCCAAGGAAGAACTTGATGAAGAATCTGAAAAAAAGGATGATGCTAATGAAGAGATTGCTCTCTCACTTTCTGAACATGTAATTCATGCTGGAAAGAGAAGGAACTCTCTTTCTACTGATCCACATCCTGATGAAAGACAGAACAATAAGAGGAGGAACCAACATAAAGGTGCTACTGTGAATTTATCCATAGATGCCAATAATCCCTGTGTAACTTCAACCCAGATCAATGCACCAGAGAATCACCATTCAACTGAAGGTGAAGCTGCTGATGACATGGTAAATGCAGATAGAATCATCAAAATTTCAGAAGTGACTTCTGAAGTGACATGTGATTACTGTGAGGTTCAAGATGGAGGCACAGATGATCATTGA
Protein:  
MVFISMVEDAQKRYTDTEAKLHAAEALQAEASQHHRAAERKLQEVEAREDDLVRHISIFKADCDAKEKEIVLERQTLSERREVLQHEHERLLDGQALLNQREDYVASKSQELSCIEKELEASKASIEKELRDLNDRKSNLEVTVASLSQREEAVIEREALLNKREQDILALKEKLASKESEEIQKVIANHETILKTRKSEFEAEVEKNCKLVENQIEAKRRAWELREVDLRQREDMLNEREHDLEVQTRLLSDKEKDMADKINFLDEKERSLNAAERDSEMRRTLLQKEKEEINKIKLELQESLNSLEDKKKQVDCAKEKLENMRSETNELSLLGMKLKEEVDMVRAQKMELVAEEDRLKVEKAKFETEWELIDEKREEMRMEAERIDEERQAVCRLLKDERDSLSLEKETIREQHKRDVESVNHEREEFMKKMEYEHSEWFNKIQKEHSDFLLGIEMQKRELENSIEKRREEVESYLRGQEKAFEIEKKNELQHISSLREKAAKGLEEVALEIQKLDSERMEINLDRERRDKEWTVLNKSIEELKDQTQKLEKQRELLRAEREEVCAQIEHLKKMEDVKIMMDNMEVAKMQQSSMESSWQKISAIRYLRNHSSVKDTDLVSHERVDITNNGNGLDSPSLQKSGVASSPDSARFSWIKRCTELIFKSSLEKPLLKSDEKSLILNNDYANLTSAGKLDSSNGYHEQKLKSIESSGKRQPMRYTFSEPNVILEPPKDVIAKEELDEESEKKDDANEEIALSLSEHVIHAGKRRNSLSTDPHPDERQNNKRRNQHKGATVNLSIDANNPCVTSTQINAPENHHSTEGEAADDMVNADRIIKISEVTSEVTCDYCEVQDGGTDDH